Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sec61a1P61620 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sec61a1P61620 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sec61a1P61620 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sec61a1P61620 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.54□□□□□ -0.24
Sec61a1P61620 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.54□□□□□ -0.24
Sec61a1P61620 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sec61a1P61620 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sec61a1P61620 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.54□□□□□ -0.24
Sec61a1P61620 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sec61a1P61620 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.53□□□□□ -0.24
Sec61a1P61620 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.53□□□□□ -0.24
Sec61a1P61620 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.53□□□□□ -0.24
Sec61a1P61620 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.53□□□□□ -0.24
Sec61a1P61620 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61a1P61620 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a1P61620 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a1P61620 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Sec61a1P61620 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a1P61620 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a1P61620 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sec61a1P61620 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms