Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ythdf1P59326 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ythdf1P59326 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ythdf1P59326 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ythdf1P59326 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ythdf1P59326 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.81□□□□□ -0.04
Ythdf1P59326 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ythdf1P59326 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ythdf1P59326 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ythdf1P59326 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ythdf1P59326 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.79□□□□□ -0.04
Ythdf1P59326 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.79□□□□□ -0.04
Ythdf1P59326 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.79□□□□□ -0.04
Ythdf1P59326 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ythdf1P59326 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Ythdf1P59326 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.78□□□□□ -0.04
Ythdf1P59326 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ythdf1P59326 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.78□□□□□ -0.04
Ythdf1P59326 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ythdf1P59326 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.78□□□□□ -0.04
Ythdf1P59326 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.78□□□□□ -0.04
Ythdf1P59326 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.78□□□□□ -0.04
Ythdf1P59326 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ythdf1P59326 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ythdf1P59326 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ythdf1P59326 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ythdf1P59326 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Ythdf1P59326 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms