Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp20P57748 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.5■□□□□ 0.39
Mmp20P57748 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp20P57748 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp20P57748 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Mmp20P57748 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Gm27989-201ENSMUST00000184721 107 ntBASIC17.49■□□□□ 0.39
Mmp20P57748 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.49■□□□□ 0.39
Mmp20P57748 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Mmp20P57748 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Mmp20P57748 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mmp20P57748 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.49■□□□□ 0.39
Mmp20P57748 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp20P57748 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Mmp20P57748 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.48■□□□□ 0.39
Mmp20P57748 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp20P57748 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.48■□□□□ 0.39
Mmp20P57748 Gm8410-201ENSMUST00000117225 605 ntBASIC17.48■□□□□ 0.39
Mmp20P57748 Gm13453-201ENSMUST00000118708 357 ntBASIC17.48■□□□□ 0.39
Mmp20P57748 Mir8102-201ENSMUST00000184148 139 ntBASIC17.48■□□□□ 0.39
Mmp20P57748 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.48■□□□□ 0.39
Mmp20P57748 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp20P57748 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mmp20P57748 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.48■□□□□ 0.39
Mmp20P57748 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Mmp20P57748 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp20P57748 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp20P57748 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Mmp20P57748 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.47■□□□□ 0.39
Mmp20P57748 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp20P57748 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp20P57748 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp20P57748 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.47■□□□□ 0.39
Mmp20P57748 Gm6888-201ENSMUST00000221983 706 ntBASIC17.47■□□□□ 0.39
Mmp20P57748 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.47■□□□□ 0.39
Mmp20P57748 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp20P57748 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mmp20P57748 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp20P57748 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp20P57748 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.47■□□□□ 0.39
Mmp20P57748 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Mmp20P57748 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.46■□□□□ 0.39
Mmp20P57748 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.46■□□□□ 0.39
Mmp20P57748 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Mmp20P57748 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Mmp20P57748 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp20P57748 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp20P57748 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp20P57748 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp20P57748 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms