Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Gm15375-201ENSMUST00000119510 849 ntBASIC12.15□□□□□ -0.46
Rab4aP56371 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rab4aP56371 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.14□□□□□ -0.47
Rab4aP56371 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rab4aP56371 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.14□□□□□ -0.47
Rab4aP56371 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rab4aP56371 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rab4aP56371 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.13□□□□□ -0.47
Rab4aP56371 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab4aP56371 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab4aP56371 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Gm42642-201ENSMUST00000200683 355 ntBASIC12.13□□□□□ -0.47
Rab4aP56371 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Matn2-206ENSMUST00000228570 2798 ntBASIC12.13□□□□□ -0.47
Rab4aP56371 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab4aP56371 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab4aP56371 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab4aP56371 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab4aP56371 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.12□□□□□ -0.47
Rab4aP56371 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 AV356131-201ENSMUST00000206201 750 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms