Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.51■□□□□ 0.23
Nub1P54729 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nub1P54729 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.51■□□□□ 0.23
Nub1P54729 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.51■□□□□ 0.23
Nub1P54729 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.51■□□□□ 0.23
Nub1P54729 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nub1P54729 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Nub1P54729 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.51■□□□□ 0.23
Nub1P54729 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nub1P54729 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.51■□□□□ 0.23
Nub1P54729 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nub1P54729 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.5■□□□□ 0.23
Nub1P54729 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Gm14722-201ENSMUST00000118943 689 ntBASIC16.5■□□□□ 0.23
Nub1P54729 Gm6550-201ENSMUST00000187574 993 ntBASIC16.5■□□□□ 0.23
Nub1P54729 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.5■□□□□ 0.23
Nub1P54729 Mzt1-203ENSMUST00000227948 952 ntBASIC16.5■□□□□ 0.23
Nub1P54729 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.5■□□□□ 0.23
Nub1P54729 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nub1P54729 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Nub1P54729 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Nub1P54729 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.49■□□□□ 0.23
Nub1P54729 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.49■□□□□ 0.23
Nub1P54729 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Nub1P54729 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.49■□□□□ 0.23
Nub1P54729 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nub1P54729 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Nub1P54729 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nub1P54729 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Nub1P54729 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nub1P54729 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Gm7222-201ENSMUST00000117512 906 ntBASIC16.48■□□□□ 0.23
Nub1P54729 Mir5131-201ENSMUST00000175426 93 ntBASIC16.48■□□□□ 0.23
Nub1P54729 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.48■□□□□ 0.23
Nub1P54729 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.48■□□□□ 0.23
Nub1P54729 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.48■□□□□ 0.23
Nub1P54729 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nub1P54729 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nub1P54729 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms