Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Brca1P48754 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.04■□□□□ 0.32
Brca1P48754 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brca1P48754 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Gm4875-201ENSMUST00000118257 786 ntBASIC17.03■□□□□ 0.32
Brca1P48754 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.03■□□□□ 0.32
Brca1P48754 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Brca1P48754 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.03■□□□□ 0.32
Brca1P48754 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.03■□□□□ 0.32
Brca1P48754 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Brca1P48754 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Gm15653-201ENSMUST00000119247 907 ntBASIC17.03■□□□□ 0.32
Brca1P48754 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.03■□□□□ 0.32
Brca1P48754 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brca1P48754 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brca1P48754 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.02■□□□□ 0.31
Brca1P48754 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.02■□□□□ 0.31
Brca1P48754 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.02■□□□□ 0.31
Brca1P48754 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Brca1P48754 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.02■□□□□ 0.31
Brca1P48754 Gm45668-201ENSMUST00000211271 493 ntBASIC17.02■□□□□ 0.31
Brca1P48754 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca1P48754 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca1P48754 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca1P48754 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Brca1P48754 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca1P48754 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Brca1P48754 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.01■□□□□ 0.31
Brca1P48754 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.01■□□□□ 0.31
Brca1P48754 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.01■□□□□ 0.31
Brca1P48754 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.01■□□□□ 0.31
Brca1P48754 Gm5566-201ENSMUST00000116118 459 ntBASIC17.01■□□□□ 0.31
Brca1P48754 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.01■□□□□ 0.31
Brca1P48754 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.01■□□□□ 0.31
Brca1P48754 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Gm43630-201ENSMUST00000201550 776 ntBASIC17.01■□□□□ 0.31
Brca1P48754 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.01■□□□□ 0.31
Brca1P48754 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Brca1P48754 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17■□□□□ 0.31
Brca1P48754 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17■□□□□ 0.31
Brca1P48754 Gm8602-201ENSMUST00000184045 607 ntBASIC17■□□□□ 0.31
Brca1P48754 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17■□□□□ 0.31
Brca1P48754 AC155729.1-201ENSMUST00000227758 544 ntBASIC17■□□□□ 0.31
Brca1P48754 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Rassf8-202ENSMUST00000058538 1131 ntBASIC17■□□□□ 0.31
Brca1P48754 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Celf4-206ENSMUST00000224553 1729 ntBASIC17■□□□□ 0.31
Brca1P48754 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Brca1P48754 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17■□□□□ 0.31
Brca1P48754 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17■□□□□ 0.31
Brca1P48754 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17■□□□□ 0.31
Brca1P48754 Gm12091-201ENSMUST00000146791 830 ntBASIC17■□□□□ 0.31
Brca1P48754 Gm38319-201ENSMUST00000194537 1266 ntBASIC17■□□□□ 0.31
Brca1P48754 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca1P48754 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Brca1P48754 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms