Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Gm5177-201ENSMUST00000183092 997 ntBASIC14.51□□□□□ -0.09
Nkx2-6P43688 Gm27494-201ENSMUST00000184735 189 ntBASIC14.51□□□□□ -0.09
Nkx2-6P43688 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-6P43688 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Gm15427-201ENSMUST00000117288 531 ntBASIC14.5□□□□□ -0.09
Nkx2-6P43688 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.5□□□□□ -0.09
Nkx2-6P43688 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-6P43688 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.49□□□□□ -0.09
Nkx2-6P43688 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.49□□□□□ -0.09
Nkx2-6P43688 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Gm45747-201ENSMUST00000212203 999 ntBASIC14.49□□□□□ -0.09
Nkx2-6P43688 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.49□□□□□ -0.09
Nkx2-6P43688 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.49□□□□□ -0.09
Nkx2-6P43688 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Nkx2-6P43688 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-6P43688 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-6P43688 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms