Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf4P43488 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfsf4P43488 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.83□□□□□ -0.04
Tnfsf4P43488 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.83□□□□□ -0.04
Tnfsf4P43488 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfsf4P43488 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.82□□□□□ -0.04
Tnfsf4P43488 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Gm27742-201ENSMUST00000184667 60 ntBASIC14.82□□□□□ -0.04
Tnfsf4P43488 Gm19164-201ENSMUST00000210667 640 ntBASIC14.82□□□□□ -0.04
Tnfsf4P43488 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfsf4P43488 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms