Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.24■□□□□ 0.35
Sdc2P43407 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.24■□□□□ 0.35
Sdc2P43407 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Gm18622-201ENSMUST00000219361 595 ntBASIC17.24■□□□□ 0.35
Sdc2P43407 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.24■□□□□ 0.35
Sdc2P43407 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sdc2P43407 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sdc2P43407 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sdc2P43407 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc2P43407 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.23■□□□□ 0.35
Sdc2P43407 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sdc2P43407 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.23■□□□□ 0.35
Sdc2P43407 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.23■□□□□ 0.35
Sdc2P43407 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
Sdc2P43407 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Sdc2P43407 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Gm14722-201ENSMUST00000118943 689 ntBASIC17.23■□□□□ 0.35
Sdc2P43407 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Gm7506-201ENSMUST00000207758 815 ntBASIC17.23■□□□□ 0.35
Sdc2P43407 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.23■□□□□ 0.35
Sdc2P43407 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.23■□□□□ 0.35
Sdc2P43407 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sdc2P43407 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc2P43407 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sdc2P43407 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Gm4459-201ENSMUST00000118750 468 ntBASIC17.22■□□□□ 0.35
Sdc2P43407 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Gm33142-201ENSMUST00000193913 867 ntBASIC17.22■□□□□ 0.35
Sdc2P43407 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.22■□□□□ 0.35
Sdc2P43407 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.22■□□□□ 0.35
Sdc2P43407 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.22■□□□□ 0.35
Sdc2P43407 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc2P43407 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc2P43407 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sdc2P43407 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sdc2P43407 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sdc2P43407 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sdc2P43407 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sdc2P43407 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sdc2P43407 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sdc2P43407 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.21■□□□□ 0.35
Sdc2P43407 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms