Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh2P43247 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh2P43247 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Msh2P43247 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Msh2P43247 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.84■□□□□ 0.13
Msh2P43247 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh2P43247 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.84■□□□□ 0.13
Msh2P43247 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Msh2P43247 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.84■□□□□ 0.13
Msh2P43247 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.84■□□□□ 0.13
Msh2P43247 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Msh2P43247 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Msh2P43247 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Msh2P43247 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.83■□□□□ 0.12
Msh2P43247 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.83■□□□□ 0.12
Msh2P43247 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.83■□□□□ 0.12
Msh2P43247 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Msh2P43247 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Msh2P43247 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Msh2P43247 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Msh2P43247 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh2P43247 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Msh2P43247 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Msh2P43247 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.82■□□□□ 0.12
Msh2P43247 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.82■□□□□ 0.12
Msh2P43247 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.82■□□□□ 0.12
Msh2P43247 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Msh2P43247 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.82■□□□□ 0.12
Msh2P43247 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Msh2P43247 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Msh2P43247 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh2P43247 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh2P43247 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Msh2P43247 Gm12895-201ENSMUST00000122214 226 ntBASIC15.81■□□□□ 0.12
Msh2P43247 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Msh2P43247 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.81■□□□□ 0.12
Msh2P43247 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.81■□□□□ 0.12
Msh2P43247 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Msh2P43247 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Msh2P43247 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msh2P43247 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh2P43247 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh2P43247 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh2P43247 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Msh2P43247 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh2P43247 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms