Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdx2P43241 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cdx2P43241 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.54□□□□□ -0.08
Cdx2P43241 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdx2P43241 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx2P43241 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdx2P43241 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.53□□□□□ -0.08
Cdx2P43241 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.53□□□□□ -0.08
Cdx2P43241 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.53□□□□□ -0.08
Cdx2P43241 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdx2P43241 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdx2P43241 Gm38225-201ENSMUST00000194001 393 ntBASIC14.53□□□□□ -0.08
Cdx2P43241 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdx2P43241 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdx2P43241 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdx2P43241 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdx2P43241 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx2P43241 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Cdx2P43241 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cdx2P43241 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx2P43241 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdx2P43241 Gm9824-201ENSMUST00000178707 561 ntBASIC14.52□□□□□ -0.09
Cdx2P43241 Gm27306-201ENSMUST00000183970 107 ntBASIC14.52□□□□□ -0.09
Cdx2P43241 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdx2P43241 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdx2P43241 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Gm27989-201ENSMUST00000184721 107 ntBASIC14.51□□□□□ -0.09
Cdx2P43241 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.51□□□□□ -0.09
Cdx2P43241 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdx2P43241 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Cdx2P43241 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.5□□□□□ -0.09
Cdx2P43241 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdx2P43241 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Gm8410-201ENSMUST00000117225 605 ntBASIC14.5□□□□□ -0.09
Cdx2P43241 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.5□□□□□ -0.09
Cdx2P43241 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.5□□□□□ -0.09
Cdx2P43241 Gm15483-201ENSMUST00000120338 456 ntBASIC14.5□□□□□ -0.09
Cdx2P43241 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdx2P43241 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.5□□□□□ -0.09
Cdx2P43241 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdx2P43241 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdx2P43241 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Cdx2P43241 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdx2P43241 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdx2P43241 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms