Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Olfr129-201ENSMUST00000122318 993 ntBASIC14.45□□□□□ -0.1
Sox6P40645 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.45□□□□□ -0.1
Sox6P40645 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.45□□□□□ -0.1
Sox6P40645 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sox6P40645 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.45□□□□□ -0.1
Sox6P40645 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox6P40645 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox6P40645 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.44□□□□□ -0.1
Sox6P40645 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox6P40645 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Mir3081-201ENSMUST00000175305 84 ntBASIC14.44□□□□□ -0.1
Sox6P40645 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.44□□□□□ -0.1
Sox6P40645 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox6P40645 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.44□□□□□ -0.1
Sox6P40645 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sox6P40645 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox6P40645 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox6P40645 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.43□□□□□ -0.1
Sox6P40645 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox6P40645 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Gm17807-201ENSMUST00000186869 298 ntBASIC14.43□□□□□ -0.1
Sox6P40645 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms