Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Thbs1P35441 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Gm44771-201ENSMUST00000206975 626 ntBASIC14.18□□□□□ -0.14
Thbs1P35441 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Thbs1P35441 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.18□□□□□ -0.14
Thbs1P35441 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.18□□□□□ -0.14
Thbs1P35441 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Thbs1P35441 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
Thbs1P35441 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs1P35441 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Thbs1P35441 Sybu-209ENSMUST00000228639 4113 ntBASIC14.17□□□□□ -0.14
Thbs1P35441 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Thbs1P35441 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Thbs1P35441 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.17□□□□□ -0.14
Thbs1P35441 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.17□□□□□ -0.14
Thbs1P35441 Gm8318-201ENSMUST00000182954 872 ntBASIC14.17□□□□□ -0.14
Thbs1P35441 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.17□□□□□ -0.14
Thbs1P35441 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Thbs1P35441 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs1P35441 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Thbs1P35441 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.16□□□□□ -0.14
Thbs1P35441 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.16□□□□□ -0.14
Thbs1P35441 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Thbs1P35441 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.16□□□□□ -0.14
Thbs1P35441 Gm27459-201ENSMUST00000184860 107 ntBASIC14.16□□□□□ -0.14
Thbs1P35441 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Thbs1P35441 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.16□□□□□ -0.14
Thbs1P35441 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.16□□□□□ -0.14
Thbs1P35441 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Thbs1P35441 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs1P35441 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.16□□□□□ -0.14
Thbs1P35441 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Thbs1P35441 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms