Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.24□□□□□ -0.29
Slc6a1P31648 Gm25016-201ENSMUST00000158399 131 ntBASIC13.24□□□□□ -0.29
Slc6a1P31648 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Gm7791-201ENSMUST00000219066 539 ntBASIC13.24□□□□□ -0.29
Slc6a1P31648 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.24□□□□□ -0.29
Slc6a1P31648 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.24□□□□□ -0.29
Slc6a1P31648 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a1P31648 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a1P31648 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.23□□□□□ -0.29
Slc6a1P31648 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.23□□□□□ -0.29
Slc6a1P31648 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.23□□□□□ -0.29
Slc6a1P31648 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.23□□□□□ -0.29
Slc6a1P31648 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Gm22697-201ENSMUST00000175194 63 ntBASIC13.23□□□□□ -0.29
Slc6a1P31648 Gm27389-201ENSMUST00000183622 195 ntBASIC13.23□□□□□ -0.29
Slc6a1P31648 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Slc6a1P31648 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a1P31648 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Slc6a1P31648 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a1P31648 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc6a1P31648 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.22□□□□□ -0.29
Slc6a1P31648 Mir1668-201ENSMUST00000184114 107 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms