Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Vcam1P29533 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vcam1P29533 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Vcam1P29533 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vcam1P29533 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.58■□□□□ 0.4
Vcam1P29533 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Gm2810-201ENSMUST00000118681 990 ntBASIC17.58■□□□□ 0.4
Vcam1P29533 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.58■□□□□ 0.4
Vcam1P29533 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Vcam1P29533 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Vcam1P29533 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vcam1P29533 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Vcam1P29533 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.57■□□□□ 0.4
Vcam1P29533 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.57■□□□□ 0.4
Vcam1P29533 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
Vcam1P29533 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.57■□□□□ 0.4
Vcam1P29533 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vcam1P29533 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.57■□□□□ 0.4
Vcam1P29533 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.57■□□□□ 0.4
Vcam1P29533 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Vcam1P29533 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.57■□□□□ 0.4
Vcam1P29533 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vcam1P29533 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vcam1P29533 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.56■□□□□ 0.4
Vcam1P29533 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Gm24158-201ENSMUST00000175263 71 ntBASIC17.56■□□□□ 0.4
Vcam1P29533 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.56■□□□□ 0.4
Vcam1P29533 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.56■□□□□ 0.4
Vcam1P29533 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.56■□□□□ 0.4
Vcam1P29533 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vcam1P29533 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.56■□□□□ 0.4
Vcam1P29533 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vcam1P29533 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vcam1P29533 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vcam1P29533 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vcam1P29533 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.55■□□□□ 0.4
Vcam1P29533 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Gm14057-201ENSMUST00000120631 482 ntBASIC17.55■□□□□ 0.4
Vcam1P29533 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
Vcam1P29533 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Gm5779-201ENSMUST00000218467 910 ntBASIC17.55■□□□□ 0.4
Vcam1P29533 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.55■□□□□ 0.4
Vcam1P29533 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vcam1P29533 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Vcam1P29533 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vcam1P29533 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms