Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col2a1P28481 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col2a1P28481 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.24■□□□□ 0.35
Col2a1P28481 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm20949-201ENSMUST00000206478 952 ntBASIC17.24■□□□□ 0.35
Col2a1P28481 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col2a1P28481 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Col2a1P28481 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col2a1P28481 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col2a1P28481 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm27680-201ENSMUST00000184192 160 ntBASIC17.24■□□□□ 0.35
Col2a1P28481 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.24■□□□□ 0.35
Col2a1P28481 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col2a1P28481 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.24■□□□□ 0.35
Col2a1P28481 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.24■□□□□ 0.35
Col2a1P28481 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.23■□□□□ 0.35
Col2a1P28481 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 Gm18766-201ENSMUST00000189811 808 ntBASIC17.23■□□□□ 0.35
Col2a1P28481 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col2a1P28481 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.23■□□□□ 0.35
Col2a1P28481 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.23■□□□□ 0.35
Col2a1P28481 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.22■□□□□ 0.35
Col2a1P28481 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col2a1P28481 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col2a1P28481 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col2a1P28481 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.22■□□□□ 0.35
Col2a1P28481 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.22■□□□□ 0.35
Col2a1P28481 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col2a1P28481 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Col2a1P28481 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col2a1P28481 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col2a1P28481 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col2a1P28481 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
Col2a1P28481 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col2a1P28481 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col2a1P28481 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col2a1P28481 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.21■□□□□ 0.35
Col2a1P28481 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col2a1P28481 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col2a1P28481 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms