Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.02□□□□□ -0.16
Cbx3P23198 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cbx3P23198 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.02□□□□□ -0.17
Cbx3P23198 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.02□□□□□ -0.17
Cbx3P23198 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cbx3P23198 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cbx3P23198 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cbx3P23198 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.01□□□□□ -0.17
Cbx3P23198 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cbx3P23198 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.01□□□□□ -0.17
Cbx3P23198 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.01□□□□□ -0.17
Cbx3P23198 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.01□□□□□ -0.17
Cbx3P23198 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Cbx3P23198 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cbx3P23198 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.01□□□□□ -0.17
Cbx3P23198 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cbx3P23198 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cbx3P23198 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cbx3P23198 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cbx3P23198 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14□□□□□ -0.17
Cbx3P23198 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14□□□□□ -0.17
Cbx3P23198 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cbx3P23198 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14□□□□□ -0.17
Cbx3P23198 Gm10517-202ENSMUST00000192970 758 ntBASIC14□□□□□ -0.17
Cbx3P23198 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cbx3P23198 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Cbx3P23198 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cbx3P23198 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cbx3P23198 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14□□□□□ -0.17
Cbx3P23198 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cbx3P23198 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cbx3P23198 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cbx3P23198 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cbx3P23198 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.99□□□□□ -0.17
Cbx3P23198 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cbx3P23198 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cbx3P23198 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms