Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.73□□□□□ -0.37
Cxcl1P12850 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.73□□□□□ -0.37
Cxcl1P12850 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cxcl1P12850 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.72□□□□□ -0.37
Cxcl1P12850 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cxcl1P12850 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Gm10013-201ENSMUST00000106074 672 ntBASIC12.72□□□□□ -0.37
Cxcl1P12850 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.72□□□□□ -0.37
Cxcl1P12850 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cxcl1P12850 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cxcl1P12850 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cxcl1P12850 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.71□□□□□ -0.37
Cxcl1P12850 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cxcl1P12850 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cxcl1P12850 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Gm15565-201ENSMUST00000118890 427 ntBASIC12.71□□□□□ -0.37
Cxcl1P12850 Gm13312-201ENSMUST00000119631 718 ntBASIC12.71□□□□□ -0.37
Cxcl1P12850 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cxcl1P12850 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.71□□□□□ -0.37
Cxcl1P12850 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.71□□□□□ -0.37
Cxcl1P12850 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cxcl1P12850 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cxcl1P12850 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cxcl1P12850 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl1P12850 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.71□□□□□ -0.38
Cxcl1P12850 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.71□□□□□ -0.38
Cxcl1P12850 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl1P12850 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl1P12850 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Cxcl1P12850 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl1P12850 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl1P12850 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cxcl1P12850 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Cxcl1P12850 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cxcl1P12850 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cxcl1P12850 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cxcl1P12850 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cxcl1P12850 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl1P12850 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms