Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc9P09633 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hoxc9P09633 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Hoxc9P09633 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.81■□□□□ 0.76
Hoxc9P09633 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.81■□□□□ 0.76
Hoxc9P09633 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.81■□□□□ 0.76
Hoxc9P09633 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hoxc9P09633 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc9P09633 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc9P09633 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.8■□□□□ 0.76
Hoxc9P09633 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.8■□□□□ 0.76
Hoxc9P09633 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.8■□□□□ 0.76
Hoxc9P09633 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hoxc9P09633 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.8■□□□□ 0.76
Hoxc9P09633 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Hoxc9P09633 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc9P09633 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.8■□□□□ 0.76
Hoxc9P09633 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc9P09633 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.79■□□□□ 0.76
Hoxc9P09633 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Hoxc9P09633 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Hoxc9P09633 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.79■□□□□ 0.76
Hoxc9P09633 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.79■□□□□ 0.76
Hoxc9P09633 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.79■□□□□ 0.76
Hoxc9P09633 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hoxc9P09633 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hoxc9P09633 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.79■□□□□ 0.76
Hoxc9P09633 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc9P09633 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Mir6977-201ENSMUST00000184960 64 ntBASIC19.78■□□□□ 0.76
Hoxc9P09633 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Gm5186-201ENSMUST00000218781 920 ntBASIC19.78■□□□□ 0.76
Hoxc9P09633 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc9P09633 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc9P09633 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms