Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.24□□□□□ -0.61
TcraP01849 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TcraP01849 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TcraP01849 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.24□□□□□ -0.61
TcraP01849 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TcraP01849 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.24□□□□□ -0.61
TcraP01849 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.24□□□□□ -0.61
TcraP01849 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TcraP01849 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.24□□□□□ -0.61
TcraP01849 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TcraP01849 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.23□□□□□ -0.61
TcraP01849 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Efs-202ENSMUST00000227037 2540 ntBASIC11.23□□□□□ -0.61
TcraP01849 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Odf3b-204ENSMUST00000227834 930 ntBASIC11.23□□□□□ -0.61
TcraP01849 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TcraP01849 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TcraP01849 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.23□□□□□ -0.61
TcraP01849 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.23□□□□□ -0.61
TcraP01849 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.23□□□□□ -0.61
TcraP01849 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TcraP01849 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TcraP01849 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TcraP01849 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.22□□□□□ -0.61
TcraP01849 Gm27463-201ENSMUST00000183569 57 ntBASIC11.22□□□□□ -0.61
TcraP01849 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.22□□□□□ -0.61
TcraP01849 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.22□□□□□ -0.61
TcraP01849 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.22□□□□□ -0.61
TcraP01849 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.22□□□□□ -0.61
TcraP01849 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms