Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.75■□□□□ 0.11
Syn1O88935 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Syn1O88935 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.75■□□□□ 0.11
Syn1O88935 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Syn1O88935 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Syn1O88935 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Syn1O88935 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.75■□□□□ 0.11
Syn1O88935 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syn1O88935 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Syn1O88935 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Syn1O88935 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Syn1O88935 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.74■□□□□ 0.11
Syn1O88935 Gm12859-201ENSMUST00000117834 427 ntBASIC15.74■□□□□ 0.11
Syn1O88935 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.74■□□□□ 0.11
Syn1O88935 Gm28631-201ENSMUST00000190740 334 ntBASIC15.74■□□□□ 0.11
Syn1O88935 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.74■□□□□ 0.11
Syn1O88935 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.74■□□□□ 0.11
Syn1O88935 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.74■□□□□ 0.11
Syn1O88935 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.74■□□□□ 0.11
Syn1O88935 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Syn1O88935 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syn1O88935 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.73■□□□□ 0.11
Syn1O88935 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.73■□□□□ 0.11
Syn1O88935 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Syn1O88935 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Syn1O88935 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.73■□□□□ 0.11
Syn1O88935 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.73■□□□□ 0.11
Syn1O88935 Gm23984-201ENSMUST00000157139 203 ntBASIC15.73■□□□□ 0.11
Syn1O88935 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.73■□□□□ 0.11
Syn1O88935 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Syn1O88935 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Syn1O88935 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Syn1O88935 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Syn1O88935 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syn1O88935 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.72■□□□□ 0.11
Syn1O88935 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.72■□□□□ 0.11
Syn1O88935 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Gm2272-201ENSMUST00000194903 582 ntBASIC15.72■□□□□ 0.11
Syn1O88935 Gm44719-201ENSMUST00000206404 149 ntBASIC15.72■□□□□ 0.11
Syn1O88935 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Syn1O88935 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.72■□□□□ 0.11
Syn1O88935 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms