Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.77□□□□□ -0.21
Hdac3O88895 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Hdac3O88895 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Hdac3O88895 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Hdac3O88895 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.77□□□□□ -0.21
Hdac3O88895 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Hdac3O88895 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.77□□□□□ -0.21
Hdac3O88895 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hdac3O88895 BC037039-201ENSMUST00000192003 2205 ntBASIC13.76□□□□□ -0.21
Hdac3O88895 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Hdac3O88895 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Hdac3O88895 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hdac3O88895 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hdac3O88895 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hdac3O88895 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.76□□□□□ -0.21
Hdac3O88895 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.76□□□□□ -0.21
Hdac3O88895 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hdac3O88895 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hdac3O88895 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hdac3O88895 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hdac3O88895 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Hdac3O88895 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Gm25406-201ENSMUST00000157599 105 ntBASIC13.75□□□□□ -0.21
Hdac3O88895 Gm6257-201ENSMUST00000163864 910 ntBASIC13.75□□□□□ -0.21
Hdac3O88895 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.75□□□□□ -0.21
Hdac3O88895 Gm9172-201ENSMUST00000212092 954 ntBASIC13.75□□□□□ -0.21
Hdac3O88895 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Hdac3O88895 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hdac3O88895 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.75□□□□□ -0.21
Hdac3O88895 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hdac3O88895 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hdac3O88895 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms