Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.68■□□□□ 0.1
ShdO88834 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.68■□□□□ 0.1
ShdO88834 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.68■□□□□ 0.1
ShdO88834 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Gm5682-201ENSMUST00000173402 505 ntBASIC15.68■□□□□ 0.1
ShdO88834 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ShdO88834 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.68■□□□□ 0.1
ShdO88834 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.68■□□□□ 0.1
ShdO88834 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ShdO88834 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.68■□□□□ 0.1
ShdO88834 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.68■□□□□ 0.1
ShdO88834 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.68■□□□□ 0.1
ShdO88834 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.68■□□□□ 0.1
ShdO88834 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShdO88834 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.68■□□□□ 0.1
ShdO88834 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
ShdO88834 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ShdO88834 Gm7862-201ENSMUST00000121461 292 ntBASIC15.67■□□□□ 0.1
ShdO88834 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Gm8318-201ENSMUST00000182954 872 ntBASIC15.67■□□□□ 0.1
ShdO88834 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.67■□□□□ 0.1
ShdO88834 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
ShdO88834 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ShdO88834 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShdO88834 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.66■□□□□ 0.1
ShdO88834 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ShdO88834 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.66■□□□□ 0.1
ShdO88834 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.66■□□□□ 0.1
ShdO88834 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.66■□□□□ 0.1
ShdO88834 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ShdO88834 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.66■□□□□ 0.1
ShdO88834 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShdO88834 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ShdO88834 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ShdO88834 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms