Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Gm9229-201ENSMUST00000222777 126 ntBASIC20.15■□□□□ 0.82
Tom1O88746 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tom1O88746 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tom1O88746 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.14■□□□□ 0.82
Tom1O88746 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tom1O88746 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tom1O88746 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.14■□□□□ 0.82
Tom1O88746 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.14■□□□□ 0.82
Tom1O88746 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tom1O88746 AC131743.5-201ENSMUST00000220775 1618 ntBASIC20.14■□□□□ 0.81
Tom1O88746 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tom1O88746 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.14■□□□□ 0.81
Tom1O88746 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
Tom1O88746 Gm15678-201ENSMUST00000117573 960 ntBASIC20.14■□□□□ 0.81
Tom1O88746 Gm15593-201ENSMUST00000122085 1008 ntBASIC20.14■□□□□ 0.81
Tom1O88746 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tom1O88746 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.14■□□□□ 0.81
Tom1O88746 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tom1O88746 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tom1O88746 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Tom1O88746 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tom1O88746 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tom1O88746 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC20.13■□□□□ 0.81
Tom1O88746 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tom1O88746 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tom1O88746 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tom1O88746 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.13■□□□□ 0.81
Tom1O88746 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tom1O88746 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.13■□□□□ 0.81
Tom1O88746 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 AC155252.1-201ENSMUST00000226462 1208 ntBASIC20.13■□□□□ 0.81
Tom1O88746 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.13■□□□□ 0.81
Tom1O88746 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tom1O88746 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tom1O88746 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tom1O88746 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tom1O88746 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Tom1O88746 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC20.12■□□□□ 0.81
Tom1O88746 Mir692-1-201ENSMUST00000102263 109 ntBASIC20.12■□□□□ 0.81
Tom1O88746 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC20.12■□□□□ 0.81
Tom1O88746 Gm17794-201ENSMUST00000220252 955 ntBASIC20.12■□□□□ 0.81
Tom1O88746 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tom1O88746 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.12■□□□□ 0.81
Tom1O88746 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tom1O88746 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.11■□□□□ 0.81
Tom1O88746 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.11■□□□□ 0.81
Tom1O88746 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Tom1O88746 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.11■□□□□ 0.81
Tom1O88746 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.11■□□□□ 0.81
Tom1O88746 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Gm6244-201ENSMUST00000178732 841 ntBASIC20.11■□□□□ 0.81
Tom1O88746 CT485787.1-201ENSMUST00000225617 968 ntBASIC20.11■□□□□ 0.81
Tom1O88746 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tom1O88746 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tom1O88746 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.1■□□□□ 0.81
Tom1O88746 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tom1O88746 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC20.1■□□□□ 0.81
Tom1O88746 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tom1O88746 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.1■□□□□ 0.81
Tom1O88746 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC20.1■□□□□ 0.81
Tom1O88746 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Tom1O88746 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms