Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm11779-201ENSMUST00000118541 368 ntBASIC14.99□□□□□ -0.01
ClppO88696 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
ClppO88696 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Gm8344-201ENSMUST00000119813 856 ntBASIC14.98□□□□□ -0.01
ClppO88696 Gm2756-201ENSMUST00000195851 400 ntBASIC14.98□□□□□ -0.01
ClppO88696 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.98□□□□□ -0.01
ClppO88696 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.98□□□□□ -0.01
ClppO88696 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.98□□□□□ -0.01
ClppO88696 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ClppO88696 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ClppO88696 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ClppO88696 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ClppO88696 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.97□□□□□ -0.01
ClppO88696 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ClppO88696 Gm9727-201ENSMUST00000161387 555 ntBASIC14.97□□□□□ -0.01
ClppO88696 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.97□□□□□ -0.01
ClppO88696 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.97□□□□□ -0.01
ClppO88696 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
ClppO88696 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.97□□□□□ -0.01
ClppO88696 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.97□□□□□ -0.01
ClppO88696 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ClppO88696 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ClppO88696 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.96□□□□□ -0.01
ClppO88696 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
ClppO88696 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ClppO88696 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.96□□□□□ -0.01
ClppO88696 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.96□□□□□ -0.01
ClppO88696 Gm27628-201ENSMUST00000184911 107 ntBASIC14.96□□□□□ -0.01
ClppO88696 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ClppO88696 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.96□□□□□ -0.01
ClppO88696 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ClppO88696 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.96□□□□□ -0.01
ClppO88696 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ClppO88696 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ClppO88696 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.96□□□□□ -0.01
ClppO88696 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms