Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cops3O88543 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cops3O88543 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cops3O88543 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.77□□□□□ -0.21
Cops3O88543 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cops3O88543 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cops3O88543 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.77□□□□□ -0.21
Cops3O88543 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.77□□□□□ -0.21
Cops3O88543 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gm15794-201ENSMUST00000120182 631 ntBASIC13.77□□□□□ -0.21
Cops3O88543 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gm25406-201ENSMUST00000157599 105 ntBASIC13.77□□□□□ -0.21
Cops3O88543 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cops3O88543 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.77□□□□□ -0.21
Cops3O88543 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.77□□□□□ -0.21
Cops3O88543 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.77□□□□□ -0.21
Cops3O88543 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cops3O88543 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.77□□□□□ -0.21
Cops3O88543 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.77□□□□□ -0.21
Cops3O88543 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops3O88543 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cops3O88543 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Cops3O88543 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops3O88543 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Cops3O88543 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.75□□□□□ -0.21
Cops3O88543 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.75□□□□□ -0.21
Cops3O88543 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.75□□□□□ -0.21
Cops3O88543 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cops3O88543 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Gm17808-201ENSMUST00000200859 894 ntBASIC13.75□□□□□ -0.21
Cops3O88543 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.75□□□□□ -0.21
Cops3O88543 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.75□□□□□ -0.21
Cops3O88543 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms