Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Gm11539-201ENSMUST00000119837 557 ntBASIC12.83□□□□□ -0.36
Pfdn2O70591 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.83□□□□□ -0.36
Pfdn2O70591 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.83□□□□□ -0.36
Pfdn2O70591 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn2O70591 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pfdn2O70591 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.82□□□□□ -0.36
Pfdn2O70591 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Mir5122-201ENSMUST00000175004 89 ntBASIC12.82□□□□□ -0.36
Pfdn2O70591 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.82□□□□□ -0.36
Pfdn2O70591 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn2O70591 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn2O70591 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.81□□□□□ -0.36
Pfdn2O70591 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn2O70591 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.81□□□□□ -0.36
Pfdn2O70591 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.81□□□□□ -0.36
Pfdn2O70591 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.81□□□□□ -0.36
Pfdn2O70591 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn2O70591 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn2O70591 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn2O70591 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn2O70591 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn2O70591 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn2O70591 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn2O70591 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms