Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.14■□□□□ 0.01
Pdlim1O70400 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pdlim1O70400 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.14■□□□□ 0.01
Pdlim1O70400 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.14■□□□□ 0.01
Pdlim1O70400 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdlim1O70400 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Gm1401-201ENSMUST00000122048 772 ntBASIC15.13■□□□□ 0.01
Pdlim1O70400 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.13■□□□□ 0.01
Pdlim1O70400 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.13■□□□□ 0.01
Pdlim1O70400 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pdlim1O70400 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdlim1O70400 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim1O70400 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim1O70400 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim1O70400 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim1O70400 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Gm10499-201ENSMUST00000174094 934 ntBASIC15.12■□□□□ 0.01
Pdlim1O70400 Gm44771-201ENSMUST00000206975 626 ntBASIC15.12■□□□□ 0.01
Pdlim1O70400 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.12■□□□□ 0.01
Pdlim1O70400 Psmb5-202ENSMUST00000227257 622 ntBASIC15.12■□□□□ 0.01
Pdlim1O70400 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim1O70400 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Pdlim1O70400 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.11■□□□□ 0.01
Pdlim1O70400 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.11■□□□□ 0.01
Pdlim1O70400 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.11■□□□□ 0.01
Pdlim1O70400 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim1O70400 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms