Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim3O70209 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.92□□□□□ -0.18
Pdlim3O70209 Gm18032-201ENSMUST00000222541 538 ntBASIC13.92□□□□□ -0.18
Pdlim3O70209 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Pdlim3O70209 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim3O70209 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.91□□□□□ -0.18
Pdlim3O70209 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.91□□□□□ -0.18
Pdlim3O70209 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim3O70209 Gm9013-201ENSMUST00000132939 882 ntBASIC13.91□□□□□ -0.18
Pdlim3O70209 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.91□□□□□ -0.18
Pdlim3O70209 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pdlim3O70209 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.91□□□□□ -0.18
Pdlim3O70209 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pdlim3O70209 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.91□□□□□ -0.18
Pdlim3O70209 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pdlim3O70209 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.9□□□□□ -0.18
Pdlim3O70209 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.9□□□□□ -0.18
Pdlim3O70209 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim3O70209 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pdlim3O70209 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.9□□□□□ -0.18
Pdlim3O70209 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim3O70209 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdlim3O70209 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pdlim3O70209 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim3O70209 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim3O70209 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pdlim3O70209 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.19
Pdlim3O70209 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdlim3O70209 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms