Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.14□□□□□ -0.47
Pde6dO55057 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.14□□□□□ -0.47
Pde6dO55057 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pde6dO55057 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pde6dO55057 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.14□□□□□ -0.47
Pde6dO55057 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.14□□□□□ -0.47
Pde6dO55057 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.14□□□□□ -0.47
Pde6dO55057 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pde6dO55057 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pde6dO55057 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Pde6dO55057 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Pde6dO55057 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pde6dO55057 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pde6dO55057 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pde6dO55057 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Pde6dO55057 Gm11539-201ENSMUST00000119837 557 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Gm12933-201ENSMUST00000120203 872 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Gm42569-201ENSMUST00000200539 472 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pde6dO55057 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pde6dO55057 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.13□□□□□ -0.47
Pde6dO55057 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pde6dO55057 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pde6dO55057 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.12□□□□□ -0.47
Pde6dO55057 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.12□□□□□ -0.47
Pde6dO55057 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.12□□□□□ -0.47
Pde6dO55057 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pde6dO55057 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pde6dO55057 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms