Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rnf13O54965 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Efs-202ENSMUST00000227037 2540 ntBASIC13.94□□□□□ -0.18
Rnf13O54965 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf13O54965 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf13O54965 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.94□□□□□ -0.18
Rnf13O54965 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.93□□□□□ -0.18
Rnf13O54965 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Rnf13O54965 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Rnf13O54965 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rnf13O54965 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.93□□□□□ -0.18
Rnf13O54965 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Rnf13O54965 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf13O54965 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf13O54965 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rnf13O54965 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rnf13O54965 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Rnf13O54965 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.92□□□□□ -0.18
Rnf13O54965 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.92□□□□□ -0.18
Rnf13O54965 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Rnf13O54965 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.92□□□□□ -0.18
Rnf13O54965 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.92□□□□□ -0.18
Rnf13O54965 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf13O54965 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rnf13O54965 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rnf13O54965 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf13O54965 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms