Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Smarce1O54941 Gm8344-201ENSMUST00000119813 856 ntBASIC18.27■□□□□ 0.52
Smarce1O54941 Gm27742-201ENSMUST00000184667 60 ntBASIC18.27■□□□□ 0.52
Smarce1O54941 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.27■□□□□ 0.52
Smarce1O54941 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarce1O54941 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarce1O54941 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarce1O54941 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarce1O54941 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.27■□□□□ 0.52
Smarce1O54941 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.27■□□□□ 0.52
Smarce1O54941 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smarce1O54941 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarce1O54941 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Smarce1O54941 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarce1O54941 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarce1O54941 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.26■□□□□ 0.51
Smarce1O54941 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.26■□□□□ 0.51
Smarce1O54941 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarce1O54941 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Smarce1O54941 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smarce1O54941 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.25■□□□□ 0.51
Smarce1O54941 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.25■□□□□ 0.51
Smarce1O54941 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Smarce1O54941 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.25■□□□□ 0.51
Smarce1O54941 Gm15165-201ENSMUST00000118140 502 ntBASIC18.25■□□□□ 0.51
Smarce1O54941 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Olfr129-201ENSMUST00000122318 993 ntBASIC18.25■□□□□ 0.51
Smarce1O54941 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.25■□□□□ 0.51
Smarce1O54941 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.25■□□□□ 0.51
Smarce1O54941 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.25■□□□□ 0.51
Smarce1O54941 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.25■□□□□ 0.51
Smarce1O54941 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarce1O54941 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.24■□□□□ 0.51
Smarce1O54941 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.24■□□□□ 0.51
Smarce1O54941 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.24■□□□□ 0.51
Smarce1O54941 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.24■□□□□ 0.51
Smarce1O54941 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarce1O54941 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarce1O54941 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smarce1O54941 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smarce1O54941 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.24■□□□□ 0.51
Smarce1O54941 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarce1O54941 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarce1O54941 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smarce1O54941 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarce1O54941 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smarce1O54941 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarce1O54941 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms