Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm2O35900 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm2O35900 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Lsm2O35900 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.67□□□□□ -0.22
Lsm2O35900 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lsm2O35900 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.67□□□□□ -0.22
Lsm2O35900 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lsm2O35900 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lsm2O35900 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lsm2O35900 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.67□□□□□ -0.22
Lsm2O35900 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm2O35900 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lsm2O35900 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Lsm2O35900 Gm25406-201ENSMUST00000157599 105 ntBASIC13.66□□□□□ -0.22
Lsm2O35900 Mir5130-201ENSMUST00000175160 84 ntBASIC13.66□□□□□ -0.22
Lsm2O35900 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.66□□□□□ -0.22
Lsm2O35900 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm2O35900 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lsm2O35900 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Lsm2O35900 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm2O35900 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Carlr-201ENSMUST00000181515 2574 ntBASIC13.66□□□□□ -0.22
Lsm2O35900 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm2O35900 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm2O35900 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lsm2O35900 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm2O35900 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.65□□□□□ -0.22
Lsm2O35900 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.65□□□□□ -0.22
Lsm2O35900 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.65□□□□□ -0.22
Lsm2O35900 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm2O35900 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.65□□□□□ -0.22
Lsm2O35900 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lsm2O35900 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm2O35900 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm2O35900 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms