Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.04□□□□□ -0.64
Ndufa1O35683 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Gm37055-201ENSMUST00000191866 133 ntBASIC11.04□□□□□ -0.64
Ndufa1O35683 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.04□□□□□ -0.64
Ndufa1O35683 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ndufa1O35683 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ndufa1O35683 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Gm18115-201ENSMUST00000221209 621 ntBASIC11.03□□□□□ -0.64
Ndufa1O35683 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ndufa1O35683 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ndufa1O35683 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ndufa1O35683 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ndufa1O35683 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ndufa1O35683 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ndufa1O35683 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ndufa1O35683 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ndufa1O35683 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ndufa1O35683 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ndufa1O35683 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.02□□□□□ -0.65
Ndufa1O35683 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.02□□□□□ -0.65
Ndufa1O35683 Gm11539-201ENSMUST00000119837 557 ntBASIC11.02□□□□□ -0.65
Ndufa1O35683 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ndufa1O35683 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms