Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.54■□□□□ 0.4
Stag2O35638 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Stag2O35638 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Stag2O35638 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.54■□□□□ 0.4
Stag2O35638 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag2O35638 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Stag2O35638 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Stag2O35638 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.53■□□□□ 0.4
Stag2O35638 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Stag2O35638 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.53■□□□□ 0.4
Stag2O35638 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.53■□□□□ 0.4
Stag2O35638 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.53■□□□□ 0.4
Stag2O35638 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stag2O35638 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Stag2O35638 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.52■□□□□ 0.4
Stag2O35638 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.52■□□□□ 0.4
Stag2O35638 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.52■□□□□ 0.4
Stag2O35638 Gm5177-201ENSMUST00000183092 997 ntBASIC17.52■□□□□ 0.4
Stag2O35638 Mir8117-201ENSMUST00000184773 107 ntBASIC17.52■□□□□ 0.4
Stag2O35638 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Gm45747-201ENSMUST00000212203 999 ntBASIC17.52■□□□□ 0.4
Stag2O35638 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Stag2O35638 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Stag2O35638 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stag2O35638 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stag2O35638 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Stag2O35638 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.51■□□□□ 0.39
Stag2O35638 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.51■□□□□ 0.39
Stag2O35638 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Stag2O35638 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Stag2O35638 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Gm44492-201ENSMUST00000197012 141 ntBASIC17.51■□□□□ 0.39
Stag2O35638 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Stag2O35638 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.51■□□□□ 0.39
Stag2O35638 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Stag2O35638 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag2O35638 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag2O35638 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag2O35638 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag2O35638 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Stag2O35638 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag2O35638 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms