Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
Nr1i3O35627 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1i3O35627 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.49■□□□□ 0.23
Nr1i3O35627 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.49■□□□□ 0.23
Nr1i3O35627 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.49■□□□□ 0.23
Nr1i3O35627 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.49■□□□□ 0.23
Nr1i3O35627 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1i3O35627 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Nr1i3O35627 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.48■□□□□ 0.23
Nr1i3O35627 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Sybu-209ENSMUST00000228639 4113 ntBASIC16.48■□□□□ 0.23
Nr1i3O35627 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nr1i3O35627 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1i3O35627 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.47■□□□□ 0.23
Nr1i3O35627 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1i3O35627 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nr1i3O35627 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.47■□□□□ 0.23
Nr1i3O35627 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm12644-201ENSMUST00000119935 606 ntBASIC16.47■□□□□ 0.23
Nr1i3O35627 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nr1i3O35627 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Nr1i3O35627 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.47■□□□□ 0.23
Nr1i3O35627 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nr1i3O35627 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1i3O35627 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms