Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Efnb3O35393 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Efnb3O35393 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Efnb3O35393 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Gm7367-201ENSMUST00000057611 492 ntBASIC12.16□□□□□ -0.46
Efnb3O35393 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Efnb3O35393 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Efnb3O35393 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.16□□□□□ -0.46
Efnb3O35393 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Efnb3O35393 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Efnb3O35393 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.15□□□□□ -0.46
Efnb3O35393 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.15□□□□□ -0.46
Efnb3O35393 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm21559-201ENSMUST00000220638 855 ntBASIC12.15□□□□□ -0.46
Efnb3O35393 Gm8587-201ENSMUST00000076538 843 ntBASIC12.15□□□□□ -0.46
Efnb3O35393 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Efnb3O35393 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Efnb3O35393 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Efnb3O35393 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Efnb3O35393 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.15□□□□□ -0.46
Efnb3O35393 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Efnb3O35393 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Efnb3O35393 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Efnb3O35393 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Efnb3O35393 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Efnb3O35393 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Efnb3O35393 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.14□□□□□ -0.47
Efnb3O35393 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Efnb3O35393 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.14□□□□□ -0.47
Efnb3O35393 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.14□□□□□ -0.47
Efnb3O35393 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms