Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm8825-201ENSMUST00000182565 998 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm4518-201ENSMUST00000182638 718 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.23□□□□□ -0.13
Capn1O35350 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Capn1O35350 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.23□□□□□ -0.13
Capn1O35350 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Prob1-201ENSMUST00000097619 3021 ntBASIC14.23□□□□□ -0.13
Capn1O35350 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capn1O35350 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.22□□□□□ -0.13
Capn1O35350 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.22□□□□□ -0.13
Capn1O35350 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.22□□□□□ -0.13
Capn1O35350 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Gm12260-201ENSMUST00000122447 411 ntBASIC14.22□□□□□ -0.13
Capn1O35350 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.22□□□□□ -0.13
Capn1O35350 Gm9727-201ENSMUST00000161387 555 ntBASIC14.22□□□□□ -0.13
Capn1O35350 Gm27646-201ENSMUST00000183989 110 ntBASIC14.22□□□□□ -0.13
Capn1O35350 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.22□□□□□ -0.13
Capn1O35350 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Capn1O35350 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capn1O35350 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Capn1O35350 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Capn1O35350 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Gm14494-201ENSMUST00000118786 435 ntBASIC14.21□□□□□ -0.13
Capn1O35350 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Capn1O35350 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Gm25925-201ENSMUST00000158314 306 ntBASIC14.21□□□□□ -0.13
Capn1O35350 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Capn1O35350 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.21□□□□□ -0.13
Capn1O35350 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Capn1O35350 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.21□□□□□ -0.13
Capn1O35350 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.21□□□□□ -0.13
Capn1O35350 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.21□□□□□ -0.13
Capn1O35350 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Capn1O35350 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capn1O35350 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Capn1O35350 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Capn1O35350 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms