Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Tnfsf11O35235 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Gm22240-201ENSMUST00000175225 82 ntBASIC12□□□□□ -0.49
Tnfsf11O35235 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfsf11O35235 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Tnfsf11O35235 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Gm8784-201ENSMUST00000222096 1435 ntBASIC12□□□□□ -0.49
Tnfsf11O35235 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12□□□□□ -0.49
Tnfsf11O35235 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12□□□□□ -0.49
Tnfsf11O35235 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12□□□□□ -0.49
Tnfsf11O35235 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf11O35235 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Gm7213-201ENSMUST00000215977 950 ntBASIC11.99□□□□□ -0.49
Tnfsf11O35235 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.99□□□□□ -0.49
Tnfsf11O35235 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Tnfsf11O35235 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Gm16061-201ENSMUST00000122167 857 ntBASIC11.98□□□□□ -0.49
Tnfsf11O35235 Gm6257-201ENSMUST00000163864 910 ntBASIC11.98□□□□□ -0.49
Tnfsf11O35235 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.98□□□□□ -0.49
Tnfsf11O35235 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.98□□□□□ -0.49
Tnfsf11O35235 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms