Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.28■□□□□ 0.52
Hdac1O09106 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hdac1O09106 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.27■□□□□ 0.52
Hdac1O09106 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.27■□□□□ 0.52
Hdac1O09106 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hdac1O09106 Gm8344-201ENSMUST00000119813 856 ntBASIC18.27■□□□□ 0.52
Hdac1O09106 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Hdac1O09106 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.27■□□□□ 0.52
Hdac1O09106 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hdac1O09106 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.27■□□□□ 0.52
Hdac1O09106 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Hdac1O09106 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hdac1O09106 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Hdac1O09106 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.27■□□□□ 0.51
Hdac1O09106 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hdac1O09106 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Celf4-206ENSMUST00000224553 1729 ntBASIC18.26■□□□□ 0.51
Hdac1O09106 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.26■□□□□ 0.51
Hdac1O09106 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hdac1O09106 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Hdac1O09106 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Hdac1O09106 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hdac1O09106 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Gm25745-201ENSMUST00000174945 133 ntBASIC18.25■□□□□ 0.51
Hdac1O09106 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Hdac1O09106 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Hdac1O09106 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Hdac1O09106 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.25■□□□□ 0.51
Hdac1O09106 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.25■□□□□ 0.51
Hdac1O09106 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.25■□□□□ 0.51
Hdac1O09106 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Hdac1O09106 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hdac1O09106 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hdac1O09106 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms