Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Pkd1O08852 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Pkd1O08852 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.56□□□□□ -0.88
Pkd1O08852 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.56□□□□□ -0.88
Pkd1O08852 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
Pkd1O08852 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Pkd1O08852 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Pkd1O08852 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Pkd1O08852 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Pkd1O08852 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Pkd1O08852 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC9.55□□□□□ -0.88
Pkd1O08852 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Pkd1O08852 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Pkd1O08852 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 Gm45453-201ENSMUST00000211758 853 ntBASIC9.55□□□□□ -0.88
Pkd1O08852 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.55□□□□□ -0.88
Pkd1O08852 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Pkd1O08852 Gm42693-201ENSMUST00000196779 631 ntBASIC9.55□□□□□ -0.88
Pkd1O08852 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.55□□□□□ -0.88
Pkd1O08852 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Pkd1O08852 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.55□□□□□ -0.88
Pkd1O08852 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pkd1O08852 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Pkd1O08852 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Pkd1O08852 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Pkd1O08852 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Gm13216-201ENSMUST00000117145 591 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm15198-201ENSMUST00000117283 177 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm12341-201ENSMUST00000119724 503 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm27701-201ENSMUST00000184498 110 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm2451-201ENSMUST00000199447 999 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm10290-201ENSMUST00000200451 999 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm16476-201ENSMUST00000221544 139 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 AC131743.5-201ENSMUST00000220775 1618 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Gm9002-201ENSMUST00000178437 499 ntBASIC9.54□□□□□ -0.88
Pkd1O08852 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Pkd1O08852 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Pkd1O08852 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pkd1O08852 Gm23931-201ENSMUST00000103842 109 ntBASIC9.53□□□□□ -0.88
Pkd1O08852 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pkd1O08852 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC9.53□□□□□ -0.88
Pkd1O08852 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Pkd1O08852 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.53□□□□□ -0.88
Pkd1O08852 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.53□□□□□ -0.88
Pkd1O08852 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.53□□□□□ -0.88
Pkd1O08852 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pkd1O08852 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pkd1O08852 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Pkd1O08852 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms