Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.8■□□□□ 0.12
Trove2O08848 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trove2O08848 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.8■□□□□ 0.12
Trove2O08848 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.8■□□□□ 0.12
Trove2O08848 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.8■□□□□ 0.12
Trove2O08848 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trove2O08848 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trove2O08848 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trove2O08848 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trove2O08848 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trove2O08848 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trove2O08848 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.79■□□□□ 0.12
Trove2O08848 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trove2O08848 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trove2O08848 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.79■□□□□ 0.12
Trove2O08848 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trove2O08848 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.79■□□□□ 0.12
Trove2O08848 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trove2O08848 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.78■□□□□ 0.12
Trove2O08848 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trove2O08848 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trove2O08848 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trove2O08848 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.77■□□□□ 0.12
Trove2O08848 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trove2O08848 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.77■□□□□ 0.12
Trove2O08848 Mir770-201ENSMUST00000103252 94 ntBASIC15.77■□□□□ 0.12
Trove2O08848 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trove2O08848 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trove2O08848 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trove2O08848 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trove2O08848 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.77■□□□□ 0.11
Trove2O08848 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trove2O08848 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trove2O08848 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Trove2O08848 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trove2O08848 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trove2O08848 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trove2O08848 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms