Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tcof1O08784 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Tcof1O08784 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Tcof1O08784 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tcof1O08784 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.94■□□□□ 0.46
Tcof1O08784 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.94■□□□□ 0.46
Tcof1O08784 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.94■□□□□ 0.46
Tcof1O08784 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Gm10175-201ENSMUST00000086013 645 ntBASIC17.94■□□□□ 0.46
Tcof1O08784 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.94■□□□□ 0.46
Tcof1O08784 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Tcof1O08784 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tcof1O08784 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tcof1O08784 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tcof1O08784 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tcof1O08784 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Tcof1O08784 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.93■□□□□ 0.46
Tcof1O08784 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.93■□□□□ 0.46
Tcof1O08784 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.93■□□□□ 0.46
Tcof1O08784 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tcof1O08784 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tcof1O08784 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.92■□□□□ 0.46
Tcof1O08784 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Gm10499-201ENSMUST00000174094 934 ntBASIC17.92■□□□□ 0.46
Tcof1O08784 Gm24513-201ENSMUST00000174964 138 ntBASIC17.92■□□□□ 0.46
Tcof1O08784 Gm27397-201ENSMUST00000184997 107 ntBASIC17.92■□□□□ 0.46
Tcof1O08784 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.92■□□□□ 0.46
Tcof1O08784 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tcof1O08784 Gm18246-201ENSMUST00000221023 728 ntBASIC17.92■□□□□ 0.46
Tcof1O08784 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Tcof1O08784 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.92■□□□□ 0.46
Tcof1O08784 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tcof1O08784 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tcof1O08784 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Tcof1O08784 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.91■□□□□ 0.46
Tcof1O08784 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tcof1O08784 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tcof1O08784 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.91■□□□□ 0.46
Tcof1O08784 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.91■□□□□ 0.46
Tcof1O08784 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tcof1O08784 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms