Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm14859-201ENSMUST00000117752 357 ntBASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Tnfrsf11bO08712 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf11bO08712 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Tnfrsf11bO08712 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf11bO08712 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms