Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm10553J3QPF1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Gm1401-201ENSMUST00000122048 772 ntBASIC11.73□□□□□ -0.53
Gm10553J3QPF1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 AW822252-206ENSMUST00000208904 237 ntBASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.73□□□□□ -0.53
Gm10553J3QPF1 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Gm10553J3QPF1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.72□□□□□ -0.53
Gm10553J3QPF1 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm10553J3QPF1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm10553J3QPF1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm10553J3QPF1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm10553J3QPF1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms