Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc149F6V035 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.55■□□□□ 0.08
Ccdc149F6V035 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Gm8396-201ENSMUST00000057361 823 ntBASIC15.55■□□□□ 0.08
Ccdc149F6V035 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.55■□□□□ 0.08
Ccdc149F6V035 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc149F6V035 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Gm15920-201ENSMUST00000118998 402 ntBASIC15.54■□□□□ 0.08
Ccdc149F6V035 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.54■□□□□ 0.08
Ccdc149F6V035 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc149F6V035 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.53■□□□□ 0.08
Ccdc149F6V035 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.53■□□□□ 0.08
Ccdc149F6V035 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc149F6V035 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.52■□□□□ 0.08
Ccdc149F6V035 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc149F6V035 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc149F6V035 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc149F6V035 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc149F6V035 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc149F6V035 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms