Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Gm18737-201ENSMUST00000173594 937 ntBASIC18.38■□□□□ 0.53
Ube4aE9Q735 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Gm7063-201ENSMUST00000186840 981 ntBASIC18.38■□□□□ 0.53
Ube4aE9Q735 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4aE9Q735 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gm2810-201ENSMUST00000118681 990 ntBASIC18.37■□□□□ 0.53
Ube4aE9Q735 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4aE9Q735 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.36■□□□□ 0.53
Ube4aE9Q735 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Gm11543-201ENSMUST00000120758 370 ntBASIC18.36■□□□□ 0.53
Ube4aE9Q735 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube4aE9Q735 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Gm27430-201ENSMUST00000184585 107 ntBASIC18.36■□□□□ 0.53
Ube4aE9Q735 Gm44333-201ENSMUST00000197168 107 ntBASIC18.36■□□□□ 0.53
Ube4aE9Q735 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4aE9Q735 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4aE9Q735 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.34■□□□□ 0.53
Ube4aE9Q735 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.34■□□□□ 0.53
Ube4aE9Q735 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube4aE9Q735 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms