Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh17E9PXF0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh17E9PXF0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh17E9PXF0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh17E9PXF0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh17E9PXF0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh17E9PXF0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh17E9PXF0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh17E9PXF0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh17E9PXF0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms