Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim30cD3YVI9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim30cD3YVI9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Gm24589-201ENSMUST00000116692 94 ntBASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Gm7153-201ENSMUST00000117092 455 ntBASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim30cD3YVI9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Gm44454-201ENSMUST00000198541 138 ntBASIC16.77■□□□□ 0.28
Trim30cD3YVI9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim30cD3YVI9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim30cD3YVI9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim30cD3YVI9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim30cD3YVI9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.76■□□□□ 0.27
Trim30cD3YVI9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim30cD3YVI9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms