Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Syce3B5KM66 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.6■□□□□ 0.41
Syce3B5KM66 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Gm37722-201ENSMUST00000193757 208 ntBASIC17.6■□□□□ 0.41
Syce3B5KM66 Gm30025-201ENSMUST00000218555 728 ntBASIC17.6■□□□□ 0.41
Syce3B5KM66 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syce3B5KM66 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.59■□□□□ 0.41
Syce3B5KM66 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.59■□□□□ 0.41
Syce3B5KM66 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Syce3B5KM66 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.59■□□□□ 0.41
Syce3B5KM66 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Syce3B5KM66 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syce3B5KM66 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
Syce3B5KM66 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Syce3B5KM66 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Syce3B5KM66 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.58■□□□□ 0.4
Syce3B5KM66 Gm13436-201ENSMUST00000120418 567 ntBASIC17.58■□□□□ 0.4
Syce3B5KM66 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.58■□□□□ 0.4
Syce3B5KM66 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Syce3B5KM66 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Syce3B5KM66 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syce3B5KM66 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Syce3B5KM66 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.57■□□□□ 0.4
Syce3B5KM66 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Gm27011-201ENSMUST00000182352 972 ntBASIC17.57■□□□□ 0.4
Syce3B5KM66 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.57■□□□□ 0.4
Syce3B5KM66 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Syce3B5KM66 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syce3B5KM66 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Syce3B5KM66 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Syce3B5KM66 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syce3B5KM66 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.56■□□□□ 0.4
Syce3B5KM66 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Syce3B5KM66 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms